The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SPATA31A6-52:1

Chromosome

chr9

Gene Name

lnc-SPATA31A6-52

Start

41760087

CPC Label

noncoding

End

41764175

Cancer

HCC

Strand

+

Peptide

AFINTSK

Modified Peptide

n[230]AFINTSK

Peptide Length

7

ORF Length

82

Open Reading Frame (ORF)

LCNFVWSPQTPPHPSQGCSEAIPRHLGGVYIKAFINTSKWEPGVPTFGALFSTANLSTAREISGFNSDERLEAEGELQYHIF

Conservation Score

0.175

PhyloCSF Frame 1

0

No. of Spectra

5

CPC Coding Probability

0.0896569

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9988

PhyloCSF Frame 3

0

CNTI Score

-0.379154616