The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SPATA21-4:5

Chromosome

chr1

Gene Name

lnc-SPATA21-4

Start

16476929

CPC Label

noncoding

End

16483341

Cancer

OSCC

Strand

-

Peptide

LSCSHRQLEQLEGK

Modified Peptide

n[145]LSCSHRQLEQLEGK

Peptide Length

14

ORF Length

52

Open Reading Frame (ORF)

LSCSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTK

Conservation Score

1

PhyloCSF Frame 1

7.014

No. of Spectra

1

CPC Coding Probability

0.0593848

PhyloCSF Frame 2 

-4.655

CNTI Index

coding

Max Probability

0.8535

PhyloCSF Frame 3

-1.484

CNTI Score

0.746778224