The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SPATA12-2:1

Chromosome

chr3

Gene Name

lnc-SPATA12-2

Start

57078942

CPC Label

noncoding

End

57080101

Cancer

OV

Strand

+

Peptide

LGGAGGGEAGPATWAGGGPGTPAGAGAGR

Modified Peptide

n[145]LGGAGGGEAGPATWAGGGPGTPAGAGAGR

Peptide Length

29

ORF Length

50

Open Reading Frame (ORF)

LGGAGGGEAGPATWAGGGPGTPAGAGAGRRRTWTWPRPATARHPSSPCTA

Conservation Score

1

PhyloCSF Frame 1

-2.99

No. of Spectra

2

CPC Coding Probability

0.158239

PhyloCSF Frame 2 

-3.421

CNTI Index

noncoding

Max Probability

0.5025

PhyloCSF Frame 3

-2.064

CNTI Score

-0.268295973