top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-SPARCL1-1:6
Chromosome
chr4
Gene Name
lnc-SPARCL1-1
Start
87566695
CPC Label
noncoding
End
87732414
Cancer
OSCC
Strand
-
Peptide
EDQENDFK
Modified Peptide
n[145]EDQENDFK
Peptide Length
8
ORF Length
42
Open Reading Frame (ORF)
LSSFISNILETNIVIKNEAIVKEDQENDFKTISNMMILKVGH
Conservation Score
0.093
PhyloCSF Frame 1
-5.552
No. of Spectra
18
CPC Coding Probability
0.133268
PhyloCSF Frame 2
-5.231
CNTI Index
noncoding
Max Probability
0.9398
PhyloCSF Frame 3
-5.331
CNTI Score
-0.401637157
bottom of page