McDonnell Genome Institute

Washington University

Transcript

lnc-SPAG1-1:2

Chromosome

chr8

Gene Name

lnc-SPAG1-1

Start

100346875

CPC Label

noncoding

End

100351163

Cancer

BRCA-Luminal B

Strand

+

Peptide

KVMFWLEK

Modified Peptide

n[145]KVMFWLEK

Peptide Length

8

ORF Length

42

Open Reading Frame (ORF)

LPVFKKVMFWLEKHIGPRPPPQPPPPPPPPPPPRLPLSTVSL

Conservation Score

0.254

PhyloCSF Frame 1

0

No. of Spectra

2

CPC Coding Probability

0.0283796

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.995

PhyloCSF Frame 3

0

CNTI Score

-0.347768145