The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SP3-15:1

Chromosome

chr2

Gene Name

lnc-SP3-15

Start

173529919

CPC Label

coding

End

173530995

Cancer

EOGC

Strand

-

Peptide

DLDSHTLIMGDFSTPLSTLDRSTR

Modified Peptide

n[145]DLDSHTLIMGDFSTPLSTLDRSTR

Peptide Length

24

ORF Length

267

Open Reading Frame (ORF)

LSDLQRDLDSHTLIMGDFSTPLSTLDRSTRQKINKDTQELNSALHQADLIDIYRTLHAKSTEYTFFSAPHHTYSKIDHILGSKALLSKCKRTDIITNYLSDHSAIKLELRIKNLTQNRSTTWKLNNLLLNDYRVHNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAHKRRQERSKIDTLTSQLKEPEKQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRNWFFERIKKIDRSLARLIKKKREKDQIDAIKK

Conservation Score

0.38

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.994572

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.0874

PhyloCSF Frame 3

0

CNTI Score

-0.347096944