McDonnell Genome Institute

Washington University

Transcript

lnc-SOX11-6:1

Chromosome

chr2

Gene Name

lnc-SOX11-6

Start

5850137

CPC Label

noncoding

End

5920353

Cancer

CCRC

Strand

+

Peptide

AFEAGSK

Modified Peptide

n[230]AFEAGSK

Peptide Length

7

ORF Length

72

Open Reading Frame (ORF)

MAQRPWVYSARLCTYVTLQESGGSHRKVTLDANLSLEHNRMSLRTIELNTHVSSPQVPQRAFEAGSKMFIAM

Conservation Score

1

PhyloCSF Frame 1

-2.421

No. of Spectra

4

CPC Coding Probability

0.0787752

PhyloCSF Frame 2 

-3.95

CNTI Index

noncoding

Max Probability

0.9951

PhyloCSF Frame 3

-4.5

CNTI Score

-0.355804829