top of page
McDonnell Genome Institute
Washington University
Transcript
lnc-SOD1-9:4
Chromosome
chr21
Gene Name
lnc-SOD1-9
Start
31732270
CPC Label
noncoding
End
31748634
Cancer
PRAD
Strand
+
Peptide
CHHAPLIFVFLVETGFHHVDQGGLK
Modified Peptide
CHHAPLIFVFLVETGFHHVDQGGLK
Peptide Length
25
ORF Length
56
Open Reading Frame (ORF)
MCHHAPLIFVFLVETGFHHVDQGGLKLLTSSGLPTSAFQSVGITGVSHCVWLTHVY
Conservation Score
0.186
PhyloCSF Frame 1
0
No. of Spectra
7
CPC Coding Probability
0.359256
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.9165
PhyloCSF Frame 3
0
CNTI Score
0.64378859
bottom of page