McDonnell Genome Institute
Transcript
lnc-SOCS5-1:1
Chromosome
chr2
Gene Name
lnc-SOCS5-1
Start
46777782
CPC Label
noncoding
End
46780245
Cancer
BRCA-Luminal B
Strand
+
Peptide
LASGLTAILWR
Modified Peptide
n[145]LASGLTAILWR
Peptide Length
11
ORF Length
47
Open Reading Frame (ORF)
LASGLTAILWRKYEFPISTKKVRLRGKGSCSRFALEQSQDSHSDLRL
Conservation Score
0.372
PhyloCSF Frame 1
-4.439
No. of Spectra
37
CPC Coding Probability
0.0517315
PhyloCSF Frame 2
-5.032
CNTI Index
noncoding
Max Probability
0.9988
PhyloCSF Frame 3
-2.318
CNTI Score
-0.322320275