McDonnell Genome Institute
Transcript
lnc-SOCS3-3:1
Chromosome
chr17
Gene Name
lnc-SOCS3-3
Start
78377288
CPC Label
noncoding
End
78379257
Cancer
PRAD
Strand
-
Peptide
APGGLHSCSHSSQVAEER
Modified Peptide
APGGLHSCSHSSQVAEER
Peptide Length
18
ORF Length
162
Open Reading Frame (ORF)
LAVPVPAEAVGQASQERGQPWAARQEAQQSPPEHGSRRSCRRHRHGDSPLPLPLPAGANFIDKGERGHGSGAQARNPWLGEGGAAPPPSLSFPSGGHRRGTVVAPQEGVGSRPVKSVRAPGGLHSCSHSSQVAEERMRRRGSSTVTLGSNSPAVKKAFVCLF
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
11
CPC Coding Probability
0.159869
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.7614
PhyloCSF Frame 3
11.92
CNTI Score
-0.258928608