The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SNX31-1:1

Chromosome

chr8

Gene Name

lnc-SNX31-1

Start

100550527

CPC Label

noncoding

End

100559643

Cancer

LUAD

Strand

-

Peptide

LFFVTFHGIRNWLQNIISISTHGK

Modified Peptide

LFFVTFHGIRNWLQNIISISTHGK

Peptide Length

24

ORF Length

100

Open Reading Frame (ORF)

LFFVTFHGIRNWLQNIISISTHGKFHHTVKAENGKLVINGNPITIFQEQDPTKIKWGDAEAEYAVESTGIFMTIEKAGAHLMGEPKGSSSLPPLLMPPYS

Conservation Score

1

PhyloCSF Frame 1

-1.98

No. of Spectra

1

CPC Coding Probability

0.160354

PhyloCSF Frame 2 

-3.568

CNTI Index

noncoding

Max Probability

0.1257

PhyloCSF Frame 3

-1.496

CNTI Score

-0.311260573