The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SNX11-6:1

Chromosome

chr17

Gene Name

lnc-SNX11-6

Start

48126748

CPC Label

noncoding

End

48129332

Cancer

LUAD

Strand

+

Peptide

MPGHQEK

Modified Peptide

n[230]M[147]PGHQEK

Peptide Length

7

ORF Length

93

Open Reading Frame (ORF)

MSSLRTSTRSLLEHFCYGRQGSGILLPGATKMLPSVALCQLEGWWTVMGTHEGTECTQPPTAGQPHRQLDAKDTRPLRMPGHQEKKAQLAGSA

Conservation Score

1

PhyloCSF Frame 1

-2.13

No. of Spectra

10

CPC Coding Probability

0.115677

PhyloCSF Frame 2 

-3.072

CNTI Index

coding

Max Probability

0.9965

PhyloCSF Frame 3

-0.995

CNTI Score

0.618410403