McDonnell Genome Institute

Washington University

Transcript

lnc-SNAI1-5:2

Chromosome

chr20

Gene Name

lnc-SNAI1-5

Start

50030215

CPC Label

noncoding

End

50034271

Cancer

OV

Strand

+

Peptide

SSWGVGPAGWPWIGGTR

Modified Peptide

n[145]SSWGVGPAGWPWIGGTR

Peptide Length

17

ORF Length

109

Open Reading Frame (ORF)

MTVLSRVGKELREGGTQISRGQEKHSRQREQQVQRPEAGMCLVCSRTGQEASVAAKGSSREDGVCGDMAWRRLKPGGREQEGQSSPRSSWGVGPAGWPWIGGTRVSVCL

Conservation Score

0.915

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.153928

PhyloCSF Frame 2 

-4.032

CNTI Index

noncoding

Max Probability

0.5715

PhyloCSF Frame 3

0

CNTI Score

-0.334694383