McDonnell Genome Institute

Washington University

Transcript

lnc-SMURF1-1:1

Chromosome

chr7

Gene Name

lnc-SMURF1-1

Start

98998537

CPC Label

coding

End

98999930

Cancer

LUAD

Strand

-

Peptide

LTDLQNEYLQADEAK

Modified Peptide

LTDLQNEYLQADEAK

Peptide Length

15

ORF Length

140

Open Reading Frame (ORF)

MHVLLGVKPVYCKAYLKDCFEIQIRDGQVQCLNCSEPKCPSVATPGQVKEPAEAEFSARHGCLLLPSTLELVADVVCCPRLWGPAGPGCTTGICSSCNFAFCTLCRLTYHGASPCKVMAEKLTDLQNEYLQADEAKTRFL

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

3

CPC Coding Probability

0.588456

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.8318

PhyloCSF Frame 3

0

CNTI Score

-0.316401583