McDonnell Genome Institute

Washington University

Transcript

lnc-SMIM18-3:1

Chromosome

chr8

Gene Name

lnc-SMIM18-3

Start

30552344

CPC Label

noncoding

End

30553766

Cancer

EOGC

Strand

+

Peptide

TSVAPAIVTGR

Modified Peptide

n[145]TSVAPAIVTGR

Peptide Length

11

ORF Length

96

Open Reading Frame (ORF)

MSGHISHACLEAGLSLCLGQTGKESKSPGEKILPGGFCFIKPSFDQAYQDVLTVLGPCPCGLDLVPAWARTSVAPAIVTGRSGKSTRPAGSMASSS

Conservation Score

0.987

PhyloCSF Frame 1

-4.01

No. of Spectra

32

CPC Coding Probability

0.213975

PhyloCSF Frame 2 

-4.028

CNTI Index

noncoding

Max Probability

0.9997

PhyloCSF Frame 3

-4.001

CNTI Score

-0.351760619