McDonnell Genome Institute

Washington University

Transcript

lnc-SMIM14-12:1

Chromosome

chr4

Gene Name

lnc-SMIM14-12

Start

39973127

CPC Label

noncoding

End

39973442

Cancer

PRAD

Strand

-

Peptide

MQQPAVHVQGQEPLTASMLASAPQEQK

Modified Peptide

M[147]QQPAVHVQGQEPLTASMLASAPQEQK

Peptide Length

27

ORF Length

71

Open Reading Frame (ORF)

MQQPAVHVQGQEPLTASMLASAPQEQKQMFICSRVQSHSVLRFMKLAILQAHQAKEATQKAVNSAIGVPAV

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

9

CPC Coding Probability

0.129462

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.6736

PhyloCSF Frame 3

0

CNTI Score

-0.336602925