McDonnell Genome Institute
Transcript
lnc-SMARCA2-6:1
Chromosome
chr9
Gene Name
lnc-SMARCA2-6
Start
2213893
CPC Label
noncoding
End
2293037
Cancer
BRCA-Basal-like
Strand
+
Peptide
GTAEGHSRETGR
Modified Peptide
n[145]GTAEGHSRETGR
Peptide Length
12
ORF Length
120
Open Reading Frame (ORF)
MRTGIPVFALKKLPFGLLRSLSCTHINLKPQAPGADQQMKRSRGTAEGHSRETGRGTFSWGWLERSLAAGQPNSRGRSSSHSIPHFRFPIHPAKSHLHHSTKPCVDPSSPCVTRYSRDAG
Conservation Score
0.068
PhyloCSF Frame 1
0
No. of Spectra
8
CPC Coding Probability
0.234072
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.9971
PhyloCSF Frame 3
0
CNTI Score
-0.311572284