McDonnell Genome Institute

Washington University

Transcript

lnc-SMAD9-4:1

Chromosome

chr13

Gene Name

lnc-SMAD9-4

Start

36804197

CPC Label

noncoding

End

36805302

Cancer

OV

Strand

-

Peptide

LGNLIPTK

Modified Peptide

n[145]LGNLIPTK

Peptide Length

8

ORF Length

40

Open Reading Frame (ORF)

LGNLIPTKKSTKNKLGVVAHTCSPRLRWEDHLSPRRSRLW

Conservation Score

0.186

PhyloCSF Frame 1

0

No. of Spectra

25

CPC Coding Probability

0.118061

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.952

PhyloCSF Frame 3

0

CNTI Score

-0.408154797