The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SLX1B-1:1

Chromosome

chr16

Gene Name

lnc-SLX1B-1

Start

29449344

CPC Label

noncoding

End

29449915

Cancer

LUAD

Strand

+

Peptide

GSQGGAGPNAAPGPQDAVSR

Modified Peptide

n[230]GSQGGAGPNAAPGPQDAVSR

Peptide Length

20

ORF Length

58

Open Reading Frame (ORF)

MGLSRGWGKGSQGGAGPNAAPGPQDAVSRLEEEMRKLQATVQELQKRLDRLEETVQAK

Conservation Score

1

PhyloCSF Frame 1

-1.611

No. of Spectra

1

CPC Coding Probability

0.381904

PhyloCSF Frame 2 

-2.444

CNTI Index

noncoding

Max Probability

0.867

PhyloCSF Frame 3

9.457

CNTI Score

-0.309278701