McDonnell Genome Institute
Transcript
lnc-SLCO5A1-8:1
Chromosome
chr8
Gene Name
lnc-SLCO5A1-8
Start
69074356
CPC Label
noncoding
End
69266744
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
LHFLVFQPLLIFSSWK
Modified Peptide
n[145]LHFLVFQPLLIFSSWK
Peptide Length
16
ORF Length
33
Open Reading Frame (ORF)
LHFLVFQPLLIFSSWKFSCYLHHLNPSLSFKHT
Conservation Score
0.296
PhyloCSF Frame 1
-5.202
No. of Spectra
6
CPC Coding Probability
0.0525413
PhyloCSF Frame 2
-5.09
CNTI Index
noncoding
Max Probability
0.9987
PhyloCSF Frame 3
-5.142
CNTI Score
-0.362288851