The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SLC6A12-3:2

Chromosome

chr12

Gene Name

lnc-SLC6A12-3

Start

137410

CPC Label

noncoding

End

149163

Cancer

OV

Strand

-

Peptide

EHMVLRLHVLSASSMDLAR

Modified Peptide

n[145]EHM[147]VLRLHVLSASSMDLAR

Peptide Length

19

ORF Length

41

Open Reading Frame (ORF)

MLYVREHMVLRLHVLSASSMDLARDCTCSVKESSSSALGRG

Conservation Score

1

PhyloCSF Frame 1

-3.97

No. of Spectra

1

CPC Coding Probability

0.349708

PhyloCSF Frame 2 

-4.077

CNTI Index

noncoding

Max Probability

0.1648

PhyloCSF Frame 3

11.766

CNTI Score

-0.316704824