McDonnell Genome Institute

Washington University

Transcript

lnc-SLC48A1-5:1

Chromosome

chr12

Gene Name

lnc-SLC48A1-5

Start

47593207

CPC Label

noncoding

End

47593440

Cancer

CCRC

Strand

+

Peptide

TITLEVKPSDTIENVK

Modified Peptide

n[230]TITLEVKPSDTIENVK

Peptide Length

16

ORF Length

71

Open Reading Frame (ORF)

MQNFVNTLTGKTITLEVKPSDTIENVKAKIQDKDGLLPDQQRLIFARNNWKMSTPSDYDIPKGPLGTCFCT

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

2

CPC Coding Probability

0.150801

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9982

PhyloCSF Frame 3

0

CNTI Score

-0.333498636