The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SLC47A2-2:6

Chromosome

chr17

Gene Name

lnc-SLC47A2-2

Start

19640426

CPC Label

noncoding

End

19647149

Cancer

HCC

Strand

-

Peptide

EIHDEAR

Modified Peptide

n[230]EIHDEAR

Peptide Length

7

ORF Length

77

Open Reading Frame (ORF)

MNEWYTLTYSSLSVLALSTFVAFSTACNLKLKEIHDEARKLARPSNSSSLLLLACLLWTKTKKSSPCGNTIVKVGRQ

Conservation Score

0.375

PhyloCSF Frame 1

0

No. of Spectra

19

CPC Coding Probability

0.200781

PhyloCSF Frame 2 

-4.313

CNTI Index

noncoding

Max Probability

0.9999

PhyloCSF Frame 3

-4.514

CNTI Score

-0.353003933