McDonnell Genome Institute
Transcript
lnc-SLC44A5-4:3
Chromosome
chr1
Gene Name
lnc-SLC44A5-4
Start
75638166
CPC Label
coding
End
75723036
Cancer
CCRC
Strand
-
Peptide
LRNPFVINDLNMQYLIQDWR
Modified Peptide
n[230]LRNPFVINDLNM[147]QYLIQDWR
Peptide Length
20
ORF Length
229
Open Reading Frame (ORF)
MAKKSKSKPMKEILEWVSLFKYITVVVFEEEVILREPVENWPLCDCLFSLHSKGFPLDKVVAYAKLRNPFVINDLNMQYLIQDWREVYSILQAEVILLPCYAILNRDPNNPKECNLIEGEDHVEVNEEVFQKPFVEKPVSAEDHNVYIYYPTSAGSGSQRLFRKIGSRSSAYSPQSNVQKSSSYTHEEFMPGDDTNVKRFLMFCTTNIFGSLKPMDSFLTKVFLNALNM
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
1
CPC Coding Probability
0.999483
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.4283
PhyloCSF Frame 3
0
CNTI Score
0.623777337