McDonnell Genome Institute
Transcript
lnc-SLC44A5-1:1
Chromosome
chr1
Gene Name
lnc-SLC44A5-1
Start
75129973
CPC Label
noncoding
End
75132576
Cancer
BRCA-HER2-enriched
Strand
-
Peptide
AFPGPRPSPPTSRAPAPR
Modified Peptide
n[145]AFPGPRPSPPTSRAPAPR
Peptide Length
18
ORF Length
69
Open Reading Frame (ORF)
LGQTCGDRGEAQLEPERKRGQRRRIQDSRAACRRRNRALLLRTRAFPGPRPSPPTSRAPAPRVQWAIGL
Conservation Score
0.104
PhyloCSF Frame 1
-4.728
No. of Spectra
2
CPC Coding Probability
0.0368674
PhyloCSF Frame 2
-1.981
CNTI Index
noncoding
Max Probability
0.5942
PhyloCSF Frame 3
-4.049
CNTI Score
-0.330308603