McDonnell Genome Institute

Washington University

Transcript

lnc-SLC44A3-1:5

Chromosome

chr1

Gene Name

lnc-SLC44A3-1

Start

94927424

CPC Label

noncoding

End

94963247

Cancer

CCRC

Strand

+

Peptide

GEKAETLR

Modified Peptide

n[230]GEKAETLR

Peptide Length

8

ORF Length

44

Open Reading Frame (ORF)

LRGEKAETLRLKNPGRGQPPPKLHLLPPLSGAHLGQISIPEIPG

Conservation Score

0.12

PhyloCSF Frame 1

-3.1

No. of Spectra

11

CPC Coding Probability

0.0691998

PhyloCSF Frame 2 

-4.748

CNTI Index

noncoding

Max Probability

0.9975

PhyloCSF Frame 3

-6.242

CNTI Score

-0.350714989