The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SLC35C1-83:8

Chromosome

chr11

Gene Name

lnc-SLC35C1-83

Start

45722411

CPC Label

noncoding

End

45744254

Cancer

CCRC

Strand

+

Peptide

LLLWDTSDLCLK

Modified Peptide

n[230]LLLWDTSDLCLK

Peptide Length

12

ORF Length

37

Open Reading Frame (ORF)

LLLWDTSDLCLKLSHLLSALCLGLCLDGNRSVSCHYW

Conservation Score

0.01

PhyloCSF Frame 1

-5.224

No. of Spectra

6

CPC Coding Probability

0.0592962

PhyloCSF Frame 2 

-4.704

CNTI Index

noncoding

Max Probability

0.9969

PhyloCSF Frame 3

-4.015

CNTI Score

-0.355716157