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McDonnell Genome Institute
Washington University
Transcript
lnc-SLC35C1-83:11
Chromosome
chr11
Gene Name
lnc-SLC35C1-83
Start
45723308
CPC Label
noncoding
End
45744250
Cancer
BRCA-HER2-enriched
Strand
+
Peptide
LHLLPSVFPTNTR
Modified Peptide
n[145]LHLLPSVFPTNTR
Peptide Length
13
ORF Length
34
Open Reading Frame (ORF)
LHLLPSVFPTNTRASPLYPIHMPQKLTMTVGLFQ
Conservation Score
0.096
PhyloCSF Frame 1
-4.599
No. of Spectra
4
CPC Coding Probability
0.025051
PhyloCSF Frame 2
-4.55
CNTI Index
noncoding
Max Probability
0.9967
PhyloCSF Frame 3
-4.978
CNTI Score
-0.355716157
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