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McDonnell Genome Institute
Washington University
Transcript
lnc-SLC24A1-5:1
Chromosome
chr15
Gene Name
lnc-SLC24A1-5
Start
65884614
CPC Label
noncoding
End
65887152
Cancer
BRCA-Luminal B
Strand
+
Peptide
EMTHLPMAFRGLCHSGKTGYGK
Modified Peptide
n[145]EMTHLPMAFRGLCHSGKTGYGK
Peptide Length
22
ORF Length
118
Open Reading Frame (ORF)
LEKRHTKFINMYTVHWFSLGRTREMTHLPMAFRGLCHSGKTGYGKEEKRNSVEGITGEDERISGQKLIGTLSRERVCLSVVTFLILQGGEEKTIVPFSGSGSQADEGTSASSCARERG
Conservation Score
0.728
PhyloCSF Frame 1
0
No. of Spectra
2
CPC Coding Probability
0.143872
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.1459
PhyloCSF Frame 3
0
CNTI Score
-0.398742937
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