The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SLC22A23-1:1

Chromosome

chr6

Gene Name

lnc-SLC22A23-1

Start

3261545

CPC Label

noncoding

End

3266149

Cancer

OV

Strand

-

Peptide

LPPPLGTNLILS

Modified Peptide

n[145]LPPPLGTNLILS

Peptide Length

12

ORF Length

109

Open Reading Frame (ORF)

MKKQGGGKHSLCLRTAAELYDMCLRLGKAVFLLKKKKKECVRTKAAVRLFQELVFKEQLTVLSTEPPTSVLGAVCPRGGELCPVICSALRGVRKPLRLPPPLGTNLILS

Conservation Score

0.021

PhyloCSF Frame 1

0

No. of Spectra

4

CPC Coding Probability

0.114966

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.8276

PhyloCSF Frame 3

0

CNTI Score

-0.343332986