McDonnell Genome Institute
Transcript
lnc-SLC16A6-2:1
Chromosome
chr17
Gene Name
lnc-SLC16A6-2
Start
68125776
CPC Label
coding
End
68152468
Cancer
BRCA-Luminal B
Strand
-
Peptide
LHCNSACLTNTTHCRESK
Modified Peptide
n[145]LHCNSACLTNTTHCRESK
Peptide Length
18
ORF Length
277
Open Reading Frame (ORF)
MNVSAFFFRYMGTTQVPLTTIKNILRMTVELEKLLHPEPTVAQPTAYPRVPILPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCRESKLPGDKLLHYFKYLCRSIIFHDQSSLFFLTGEEASVGNPERVFMKVLQAQKKHMSIELTTEPEAASDSSGINLSVFGSEQLDTYDKSDVITALNYILPYFSAGNLDAESMLLPFIKLNSLAKVQSVGKNLQRVNRVLMGPRSIQKRPFKAVGKQSIRREQGAQAFGENAAKEKRLGSPAPRELE
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
4
CPC Coding Probability
0.998994
PhyloCSF Frame 2
0
CNTI Index
coding
Max Probability
0.3102
PhyloCSF Frame 3
2.593
CNTI Score
0.777187851