McDonnell Genome Institute
Transcript
lnc-SLC16A3-2:6
Chromosome
chr17
Gene Name
lnc-SLC16A3-2
Start
82216955
CPC Label
coding
End
82217694
Cancer
BRCA-Basal-like
Strand
+
Peptide
TRGCSLEAGVEQAVLPSGWAPK
Modified Peptide
n[145]TRGCSLEAGVEQAVLPSGWAPK
Peptide Length
22
ORF Length
175
Open Reading Frame (ORF)
LPGSQVLRPERSQEMKGPGGCEWASVSGCSRRRGVGTDSCLRAGGREAPLDRKTLQEQTSKTGTVQMGPGAGQRRQTCPTAAVTTATSWRSRPGGRASAARDPGVDTGRTRGCSLEAGVEQAVLPSGWAPKGAPSQAVLPRPASSRRRGAKVPRHPPSSAALSTAGTAACEQEVL
Conservation Score
0.106
PhyloCSF Frame 1
-3.017
No. of Spectra
1
CPC Coding Probability
0.516835
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.6854
PhyloCSF Frame 3
-4.008
CNTI Score
-0.294954383