The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SLC16A11-7:17

Chromosome

chr17

Gene Name

lnc-SLC16A11-7

Start

6996441

CPC Label

noncoding

End

7012337

Cancer

LUAD

Strand

-

Peptide

GFGSQELGVGSLGAEVEVNR

Modified Peptide

n[230]GFGSQELGVGSLGAEVEVNR

Peptide Length

20

ORF Length

34

Open Reading Frame (ORF)

MGFGSQELGVGSLGAEVEVNRVQRCGRGLGPLPG

Conservation Score

1

PhyloCSF Frame 1

2.67

No. of Spectra

41

CPC Coding Probability

0.161437

PhyloCSF Frame 2 

-2.083

CNTI Index

noncoding

Max Probability

0.9975

PhyloCSF Frame 3

-4.386

CNTI Score

-0.294824634