The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SLC15A1-4:1

Chromosome

chr13

Gene Name

lnc-SLC15A1-4

Start

98949718

CPC Label

coding

End

98950447

Cancer

EOGC

Strand

-

Peptide

LESFLYDSSWQK

Modified Peptide

n[145]LESFLYDSSWQK

Peptide Length

12

ORF Length

131

Open Reading Frame (ORF)

MAEQEQRKIPLVLENLKKRKAYQALKATQAKQALLAKKEQKKGKQLRFKRLESFLYDSSWQKHDKLHLRQLEVKPHALELPDKHSLAFVLRIQRINGVTSLVQRTIARLCLKKIFSGIFVKVTPKSLKCCL

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.592507

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.6509

PhyloCSF Frame 3

0

CNTI Score

-0.326278601