McDonnell Genome Institute
Transcript
lnc-SLC11A1-1:1
Chromosome
chr2
Gene Name
lnc-SLC11A1-1
Start
218398702
CPC Label
noncoding
End
218400070
Cancer
OV
Strand
+
Peptide
LQAGTRGGPCAAEPGSPPLRSSR
Modified Peptide
n[145]LQAGTRGGPCAAEPGSPPLRSSR
Peptide Length
23
ORF Length
133
Open Reading Frame (ORF)
LRASGLRSPTVGLWAHRVRRRAGLLGSAASPVTPTAPPVITGRPSTAGRGGGLGRPLEKVAFPRGRWNLATRKEQRVRKLQAGTRGGPCAAEPGSPPLRSSRGSLPPTPPLPPAPRFRPQPGGRPGARARVRP
Conservation Score
1
PhyloCSF Frame 1
1.313
No. of Spectra
1
CPC Coding Probability
0.00437091
PhyloCSF Frame 2
6.125
CNTI Index
noncoding
Max Probability
0.1029
PhyloCSF Frame 3
0.475
CNTI Score
-0.327779935