McDonnell Genome Institute

Washington University

Transcript

lnc-SLAIN1-11:1

Chromosome

chr13

Gene Name

lnc-SLAIN1-11

Start

78596128

CPC Label

noncoding

End

78599619

Cancer

BRCA-Basal-like

Strand

+

Peptide

ELEFGCYFK

Modified Peptide

n[145]ELEFGCYFK

Peptide Length

9

ORF Length

53

Open Reading Frame (ORF)

MFATRLISQVEKRTSRELEFGCYFKKSIKLAVFFETARKDCVAIIVALRLRWQ

Conservation Score

1

PhyloCSF Frame 1

-1.468

No. of Spectra

1

CPC Coding Probability

0.0383511

PhyloCSF Frame 2 

-2.76

CNTI Index

noncoding

Max Probability

0.997

PhyloCSF Frame 3

-3.651

CNTI Score

-0.318862854