The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SIX1-2:1

Chromosome

chr14

Gene Name

lnc-SIX1-2

Start

60638598

CPC Label

noncoding

End

60644508

Cancer

OV

Strand

-

Peptide

HLDFLTQKPTWMLNMIDLGK

Modified Peptide

n[145]HLDFLTQKPTWM[147]LNM[147]IDLGK

Peptide Length

20

ORF Length

33

Open Reading Frame (ORF)

MGRFQKHLDFLTQKPTWMLNMIDLGKRLGEAKH

Conservation Score

0.169

PhyloCSF Frame 1

-5.146

No. of Spectra

7

CPC Coding Probability

0.00927587

PhyloCSF Frame 2 

-7

CNTI Index

noncoding

Max Probability

0.828

PhyloCSF Frame 3

-6.095

CNTI Score

-0.394633523