McDonnell Genome Institute
Transcript
lnc-SIRPA-1:1
Chromosome
chr20
Gene Name
lnc-SIRPA-1
Start
1830028
CPC Label
coding
End
1836047
Cancer
OSCC
Strand
+
Peptide
CLRAPFSLHQGPEAGQGLK
Modified Peptide
n[145]CLRAPFSLHQGPEAGQGLK
Peptide Length
19
ORF Length
95
Open Reading Frame (ORF)
LQQASPESLLCTGLREARQDYTRGWRSWRECMSHARSATTLFYGLHGNRSRNQRVPRSSSHTHFSFSGDKCLRAPFSLHQGPEAGQGLKRLWLNL
Conservation Score
0.58
PhyloCSF Frame 1
-3.82
No. of Spectra
3
CPC Coding Probability
0.820573
PhyloCSF Frame 2
-2.76
CNTI Index
noncoding
Max Probability
0.8387
PhyloCSF Frame 3
-4.493
CNTI Score
-0.341467801