McDonnell Genome Institute

Washington University

Transcript

lnc-SIPA1L3-4:2

Chromosome

chr19

Gene Name

lnc-SIPA1L3-4

Start

37791734

CPC Label

coding

End

37792767

Cancer

CCRC

Strand

+

Peptide

GPSDFNGLPMGTYQAFPNIYPSQIPATPPSYESVDDINADK

Modified Peptide

n[230]GPSDFNGLPMGTYQAFPNIYPSQIPATPPSYESVDDINADK

Peptide Length

41

ORF Length

164

Open Reading Frame (ORF)

MHNLSVEAPSKILVERYLIEIAKNYNVPYEPDSVVMAEAPSGVETDLIDVGFTDDVKKGGPGRGGGGGFTAPVGGPDGMVPMPMPMPMLSANTPFSYPLPKGPSDFNGLPMGTYQAFPNIYPSQIPATPPSYESVDDINADKNISSAQIVGPGPKPEASAKLPS

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

18

CPC Coding Probability

0.996045

PhyloCSF Frame 2 

0

CNTI Index

coding

Max Probability

0.9997

PhyloCSF Frame 3

0

CNTI Score

0.752873104