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McDonnell Genome Institute
Washington University
Transcript
lnc-SHPRH-7:1
Chromosome
chr6
Gene Name
lnc-SHPRH-7
Start
146948527
CPC Label
noncoding
End
146951159
Cancer
OSCC
Strand
-
Peptide
LFVCIGGSSLNLFLNLCK
Modified Peptide
n[145]LFVCIGGSSLNLFLNLCK
Peptide Length
18
ORF Length
127
Open Reading Frame (ORF)
LSLFPTPRFKIDPSNNDAICLAPPEFYILTRPSAVVLILVMRMECVFSSCNYLLQATKMDFELVQRCQHLLIFRLFVCIGGSSLNLFLNLCKIASPTHSGHIPEMGKWEISLLIGNFSLECDHVARI
Conservation Score
1
PhyloCSF Frame 1
-5.438
No. of Spectra
2
CPC Coding Probability
0.157428
PhyloCSF Frame 2
-3.868
CNTI Index
noncoding
Max Probability
0.852
PhyloCSF Frame 3
-4.206
CNTI Score
-0.319795575
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