McDonnell Genome Institute
Transcript
lnc-SHANK2-5:3
Chromosome
chr11
Gene Name
lnc-SHANK2-5
Start
70206128
CPC Label
noncoding
End
70208988
Cancer
OSCC
Strand
-
Peptide
IVCVGCGLR
Modified Peptide
n[145]IVCVGCGLR
Peptide Length
9
ORF Length
42
Open Reading Frame (ORF)
LERMVTEGVRGPRDSGRTKMLQQPVTSARIVCVGCGLRSTRE
Conservation Score
0.007
PhyloCSF Frame 1
-4.412
No. of Spectra
1
CPC Coding Probability
0.0511021
PhyloCSF Frame 2
-3.356
CNTI Index
noncoding
Max Probability
0.1128
PhyloCSF Frame 3
-3.499
CNTI Score
-0.315612684