McDonnell Genome Institute

Washington University

Transcript

lnc-SH2D7-9:1

Chromosome

chr15

Gene Name

lnc-SH2D7-9

Start

77852755

CPC Label

noncoding

End

77853900

Cancer

BRCA-Luminal B

Strand

+

Peptide

LVGCSPNPK

Modified Peptide

n[145]LVGCSPNPK

Peptide Length

9

ORF Length

38

Open Reading Frame (ORF)

LVGCSPNPKERLGAGEAGAGVGSARGTSARHIWGDPSP

Conservation Score

0.308

PhyloCSF Frame 1

-5.281

No. of Spectra

9

CPC Coding Probability

0.140279

PhyloCSF Frame 2 

-4.843

CNTI Index

noncoding

Max Probability

0.9995

PhyloCSF Frame 3

-5.222

CNTI Score

-0.332163785