The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SH2D5-1:1

Chromosome

chr1

Gene Name

lnc-SH2D5-1

Start

20692733

CPC Label

noncoding

End

20694013

Cancer

OV

Strand

-

Peptide

EKAAPEITRK

Modified Peptide

n[145]EKAAPEITRK

Peptide Length

10

ORF Length

44

Open Reading Frame (ORF)

MKEAMVQKEKAAPEITRKLERQKRPKEGKEATGGPCPGVRRQQL

Conservation Score

0.755

PhyloCSF Frame 1

0

No. of Spectra

1

CPC Coding Probability

0.251861

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.8233

PhyloCSF Frame 3

0

CNTI Score

-0.297712827