The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SGTB-1:2

Chromosome

chr5

Gene Name

lnc-SGTB-1

Start

65924740

CPC Label

noncoding

End

65925665

Cancer

OV

Strand

-

Peptide

REAHSGPGPSRPAR

Modified Peptide

n[145]REAHSGPGPSRPAR

Peptide Length

14

ORF Length

166

Open Reading Frame (ORF)

LRGPVSARGRCGPTSAAGGSGPGAGGGAAGGRGFACKARREAHSGPGPSRPARCSLPAPRPRTPGLPSPPGWGTLATPTLLSARGPAPSQRDREPTGLRRAGRWSFFVAGNHSGSAVQLPTPALRACSPAAQLSLLQVSASYRRGDKAGAGSGKRAREMASRSCLC

Conservation Score

1

PhyloCSF Frame 1

2.561

No. of Spectra

10

CPC Coding Probability

0.14904

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.9853

PhyloCSF Frame 3

1.384

CNTI Score

-0.285979396