The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SGPL1-1:1

Chromosome

chr10

Gene Name

lnc-SGPL1-1

Start

70929924

CPC Label

noncoding

End

70932057

Cancer

CCRC

Strand

+

Peptide

FGLITGAGELEGKR

Modified Peptide

n[230]FGLITGAGELEGKR

Peptide Length

14

ORF Length

71

Open Reading Frame (ORF)

MISVYPRTVGREYFDHYTHFQQRRLSDDFLSPAKHGHSRCRFGLITGAGELEGKRLIAERKEQTFGVQSWH

Conservation Score

0.18

PhyloCSF Frame 1

-3.233

No. of Spectra

6

CPC Coding Probability

0.0950375

PhyloCSF Frame 2 

-4.191

CNTI Index

noncoding

Max Probability

0.4295

PhyloCSF Frame 3

-2.149

CNTI Score

-0.337416019