McDonnell Genome Institute
Transcript
lnc-SFTPD-6:1
Chromosome
chr10
Gene Name
lnc-SFTPD-6
Start
79892147
CPC Label
coding
End
79893175
Cancer
EOGC
Strand
-
Peptide
RSMSYDNGLAQGAGLESHGGSTFCAIASLCLMGK
Modified Peptide
n[145]RSMSYDNGLAQGAGLESHGGSTFCAIASLCLMGK
Peptide Length
34
ORF Length
228
Open Reading Frame (ORF)
LGILFNPSKAPGTAHPYDSGHIAMTYTGLSCLLILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFLYCTSCICYMLNNRSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCAIASLCLMGKLEEVFSEKELNRIKRWCMRQQNSYRGRPNKPVDTGYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWPVIQVLCMHTLGSVACH
Conservation Score
1
PhyloCSF Frame 1
0
No. of Spectra
2
CPC Coding Probability
0.996953
PhyloCSF Frame 2
0
CNTI Index
noncoding
Max Probability
0.8591
PhyloCSF Frame 3
0
CNTI Score
-0.351465566