The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SFMBT2-2:5

Chromosome

chr10

Gene Name

lnc-SFMBT2-2

Start

6911572

CPC Label

noncoding

End

7118469

Cancer

OSCC

Strand

-

Peptide

MQGWLKAGEGCTAVLR

Modified Peptide

n[145]M[147]QGWLKAGEGCTAVLR

Peptide Length

16

ORF Length

70

Open Reading Frame (ORF)

MLCWSLMHCTRFIIISFYGIGLMSLILFDLKMQGWLKAGEGCTAVLRQAEPFASKMKTVSQQPQEKEIIN

Conservation Score

1

PhyloCSF Frame 1

0

No. of Spectra

3

CPC Coding Probability

0.43427

PhyloCSF Frame 2 

0

CNTI Index

noncoding

Max Probability

0.8585

PhyloCSF Frame 3

0

CNTI Score

-0.354047447