McDonnell Genome Institute

Washington University

Transcript

lnc-SERTM1-1:1

Chromosome

chr13

Gene Name

lnc-SERTM1-1

Start

36740040

CPC Label

noncoding

End

36740863

Cancer

EOGC

Strand

+

Peptide

TVMNLTCHLENIAK

Modified Peptide

n[145]TVM[147]NLTCHLENIAK

Peptide Length

14

ORF Length

114

Open Reading Frame (ORF)

MRNISIPSRLSATTPEPPTVQPSSPRTSMELSQQGGPHCYKQCHQCHSQTVDGPSGKPWCSGHRAAQSSILTITGTAKTVMNLTCHLENIAKYNDIKNVVKQVMGASEEPPEQH

Conservation Score

1

PhyloCSF Frame 1

-4.244

No. of Spectra

1

CPC Coding Probability

0.433543

PhyloCSF Frame 2 

-3.389

CNTI Index

noncoding

Max Probability

0.4403

PhyloCSF Frame 3

-4.643

CNTI Score

-0.321108306