The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SELENOM-1:1

Chromosome

chr22

Gene Name

lnc-SELENOM-1

Start

31082158

CPC Label

noncoding

End

31084868

Cancer

PRAD

Strand

-

Peptide

LAGTFGNLTSSPPGCTHPAVIVER

Modified Peptide

LAGTFGNLTSSPPGCTHPAVIVER

Peptide Length

24

ORF Length

70

Open Reading Frame (ORF)

LAGTFGNLTSSPPGCTHPAVIVERQTPRESNALVREHTGRVPWGGHGSSWALPSGWATLVGSSLCLRGKV

Conservation Score

0.168

PhyloCSF Frame 1

-5.155

No. of Spectra

9

CPC Coding Probability

0.229821

PhyloCSF Frame 2 

-5.038

CNTI Index

noncoding

Max Probability

0.8946

PhyloCSF Frame 3

-4.813

CNTI Score

-0.324055037