The Maher Lab

McDonnell Genome Institute

Washington University

Transcript

lnc-SEC16B-8:1

Chromosome

chr1

Gene Name

lnc-SEC16B-8

Start

177616751

CPC Label

noncoding

End

177617089

Cancer

PRAD

Strand

-

Peptide

KDEEIGISNYLEPEA

Modified Peptide

​

Peptide Length

15

ORF Length

39

Open Reading Frame (ORF)

LNESTGGLLIKNAGTAVLRETAERKDEEIGISNYLEPEA

Conservation Score

0.039

PhyloCSF Frame 1

-6.139

No. of Spectra

1

CPC Coding Probability

0.0176536

PhyloCSF Frame 2 

-6.016

CNTI Index

noncoding

Max Probability

0.9028

PhyloCSF Frame 3

-5.999

CNTI Score

-0.397735972